interface graph thumbnail
legend  pdf

structure nameTERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
referenceRichmond et al. 'Embo 20 3018 2001
sourceHOMO SAPIENS
experimentX-ray (resolution=3.15, R-factor=?)
structural superfamilySRF-like;
reference complex1hbx_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTRYK/TRTSK/KRRY

Estimated binding specificities ?

readout + contactlogo
# IC=17.032 IC/col=1.002 n_of_columns=17 specificity:   
A |  71   0   4  96  76   7   0  89   1   0  63  24   1   0   0   0   0
C |  21  96   5   0   7   1   0   1   1   0   9  24   4   0  96  96   0
G |   1   0   1   0   1   4   0   5  73  96   7  24   1   0   0   0  96
T |   3   0  86   0  12  84  96   1  21   0  17  24  90  96   0   0   0
scan!

home
updated Wed Jun 24 09:25:31 2026