1hbx_ABG : 3D-footprint complex

structure name	TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
reference	Richmond et al. 'Embo 20 3018 2001
source	HOMO SAPIENS
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	SRF-like;
reference complex	1hbx_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hbx_A interface=4,7,22,27, gkkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd > 1hbx_B interface=3,6,22,25,26, kkTrgRvkikmefidnklrryTtfSKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd > 1hbx_G interface=57,60,63,64, dsaitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnydKlsRalRYyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlnsln
interface signature	TRYK/TRTSK/KRRY

Estimated binding specificities ?

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# IC=16.983 IC/col=0.999 n_of_columns=17

specificity:

A |  76   0   1  96  69  16   0  87   1   0  67  24   1   0   0   0   0
C |  15  96   1   0  11   1   0   1   4   0   1  24   1   0  96  96   0
G |   1   0   4   0   1   1   0   7  76  96  15  24   4   2   0   0  96
T |   4   0  90   0  15  78  96   1  15   0  13  24  90  94   0   0   0

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updated Mon Sep 9 12:24:13 2024