1hbx_DH : 3D-footprint complex

structure name	TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
reference	Richmond et al. 'Embo 20 3018 2001
source	HOMO SAPIENS
experiment	X-ray (resolution=3.15, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hbx_D interface=3,6,21,26, kkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd > 1hbx_H interface=55,56,59,62,63, saitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnyDKlsRalRYyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlns
interface signature	TRYK/DKRRY

Estimated binding specificities ?

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# IC=10.293 IC/col=0.858 n_of_columns=12

specificity:

A |   4   2  85   2   2  58  24   2   0   0   0   0
C |   5   2   5   2  35  12  24   4   0  96  96   0
G |   2   2   2  77  54  16  24  11   2   0   0  96
T |  85  90   4  15   5  10  24  79  94   0   0   0

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updated Fri Dec 13 09:17:18 2024