1hbx_DH : 3D-footprint complex

structure name	TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
reference	Richmond et al. 'Embo 20 3018 2001
source	HOMO SAPIENS
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	SRF-like;
reference complex	1hbx_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hbx_D interface=3,6,21,26, kkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd > 1hbx_H interface=55,56,59,62,63, saitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnyDKlsRalRYyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlns
interface signature	TRYK/DKRRY

Estimated binding specificities ?

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# IC=10.468 IC/col=0.872 n_of_columns=12

specificity:

A |   0   0   0  94  81  24  15   1  19   1  93  76
C |  96   0   0   1  13  24  15  23  77   4   1   1
G |   0  96  96   1   1  24  15  69   0   9   1   4
T |   0   0   0   0   1  24  51   3   0  82   1  15

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updated Mon Sep 9 12:24:27 2024