1hbx_DH : 3D-footprint complex

structure name	TERNARY COMPLEX OF SAP-1 AND SRF WITH SPECIFIC SRE DNA
reference	Richmond et al. 'Embo 20 3018 2001
source	HOMO SAPIENS
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	SRF-like;
reference complex	1hbx_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hbx_D interface=3,6,21,26, kkTrgRvkikmefidnklrrYttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd > 1hbx_H interface=55,56,59,62,63, saitlwqfllqllqkpqnkhmicwtsndgqfkllqaeevarlwgirknkpnmnyDKlsRalRYyyvkniikkvngqkfvykfvsypeilnmsrndyihsglyssftlns
interface signature	TRYK/DKRRY

Estimated binding specificities ?

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# IC=10.556 IC/col=0.880 n_of_columns=12

specificity:

A |  11   0  84   2   2  55  24   2   0   0   0   0
C |   2   1   2   2  26  11  24   2   0  96  96   0
G |   5   2   8  75  68  14  24  11   0   0   0  96
T |  78  93   2  17   0  16  24  81  96   0   0   0

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updated Fri Dec 15 09:08:44 2023