1hjb_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
reference	Tahirov et al.
source	HOMO SAPIENS / MUS MUSCULUS
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Leucine zipper domain;
reference complex	6mg1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hjb_A interface=11,14,17,18,21,22, dkhsdeykirRerNniAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkq > 1hjb_B interface=11,14,15,17,18,21,22, dkhsdeykirRerNNiAVrkSRdkakmrnletqhkvleltaenerlqkkveqlsrelstlrnlfkql > 1hjb_C interface=21,83,111,112,115,118, gelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepRrh
interface signature	RNAVSR/RNNAVSR/RRVDRR

Estimated binding specificities ?

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# IC=16.979 IC/col=0.894 n_of_columns=19

specificity:

A |   5  84  84   0   0  96   0  83  24  24  24   3   0   5   3   0  81  96  96
C |  66   3   6  96  96   0  96   3  24  24  24   7   0   7   3   0   3   0   0
G |   3   6   3   0   0   0   0   7  24  24  24   7   0   3  88  96   5   0   0
T |  22   3   3   0   0   0   0   3  24  24  24  79  96  81   2   0   7   0   0

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updated Tue Jul 29 14:53:49 2025