1hw2_AB : 3D-footprint complex

structure name	FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
reference	Heath et al. J.Biol.Chem. 276 17373 2001
source	Escherichia coli
experiment	X-ray (resolution=3.25, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hw2_A interface=29,38,39,40,43,44,59, spagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqk > 1hw2_B interface=29,38,39,40,43,44,59, spagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqk
interface signature	RTRTREH/RTRTREH

Estimated binding specificities ?

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# IC=9.865 IC/col=0.987 n_of_columns=10

specificity:

A |   5   0   0  10  10   0   5  69   0   0
C |   6   0   0  10  71  96   0  10  96  96
G |   5  96  96   5   5   0  85  12   0   0
T |  80   0   0  71  10   0   6   5   0   0

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updated Fri Dec 13 09:19:16 2024