1i3j_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF INTRON ENDONUCLEASE I- TEVI WITH ITS SUBSTRATE (INTRON-ASSOCIATED ENDONUCLEASE 1)
reference	Waddling et al. 'EMBO 20 3631 2001
source	Enterobacteria phage T4
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	DNA-binding domain of intron-encoded endonucleases;
redundant complexes	1t2t_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1i3j_A interface=10,20,22,27,28,29,34,42,46,51,53,77,78,80,82,83, kfckcgvriQtsaytcskcRnRsgenNSFfnhkHsditkskIsekMkgkkPsNikkiscdgvifdcaadaarhfkiSSgLvTYrvksdkwnwfyin
interface signature	QRRNSFHIMPNSSLTY

Estimated binding specificities ?

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# IC=13.703 IC/col=0.806 n_of_columns=17

specificity:

A |   2   0   0   0   0   3  24   3  75   0   0  24   0  24   9  61  94
C |   0   0   2   0   3   0  24   0   6  93  79  24   0  24  50  20   0
G |   1   0  94  96  93  25  24   9   0   2   6  24   0  24  11   6   0
T |  93  96   0   0   0  68  24  84  15   1  11  24  96  24  26   9   2

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updated Sun Aug 3 05:35:27 2025