1t2t_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF INTRON ENDONUCLEASE I- TEVI WITH OPERATOR SITE (Intron-associated endonuclease 1)
reference	Derbyshire et al. Nat.Struct.Mol.Biol. 11 936 2004
source	Enterobacteria phage T4
experiment	X-ray (resolution=2.50, R-factor=0.238)
structural superfamily	DNA-binding domain of intron-encoded endonucleases;
reference complex	1i3j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1t2t_A interface=10,20,22,27,28,29,34,42,46,51,53,77,78,80,82,83, kfckcgvriQtsaytcskcRnRsgenNSFfnhkHsditkskIsekMkgkkPsNikkiscdgvifdcaadaarhfkiSSgLvTYrvksdkwnwfyin
interface signature	QRRNSFHIMPNSSLTY

Estimated binding specificities ?

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# IC=15.653 IC/col=0.921 n_of_columns=17

specificity:

A |   0   0  96   0   0  94   0   0   7   0   7  24   3   1  24  94  94
C |   0   0   0   0  17   0  96   3   1  96  63  24  23  21  24   1   1
G |  95   0   0  96  79   0   0   1  87   0  11  24  17  23  24   1   0
T |   1  96   0   0   0   2   0  92   1   0  15  24  53  51  24   0   1

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updated Thu Sep 12 15:32:53 2024