1if1_AB : 3D-footprint complex

structure name	INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
reference	Escalante et al.
source	Mus musculus
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1if1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1if1_A interface=74,76,77,81, rmrpwlemqinsnqipgliwinkeemifqipwkhaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamnSlpdieevkdqsrnkgssavrvyrm > 1if1_B interface=33,73,75,76,79,80, mrpwlemqinsnqipgliwinkeemifqipwkHaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamNSlpdieevkdqsrnkgssavrvyrm
interface signature	NRCS/HNRCNS

Estimated binding specificities ?

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# IC=12.317 IC/col=0.725 n_of_columns=17

specificity:

A |   3  24  24   0   0  24  96  24  24   0  96  19  19   0  57   0  80
C |  92  24  24   0   0  24   0  24  24   0   0  70  19   0  16  96   3
G |   1  24  24   0  96  24   0  24  24   0   0   4  16   0   0   0   9
T |   0  24  24  96   0  24   0  24  24  96   0   3  42  96  23   0   4

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updated Mon Sep 9 12:29:25 2024