1if1_AB : 3D-footprint complex

structure name	INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
reference	Escalante et al.
source	Mus musculus
experiment	X-ray (resolution=3.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1if1_A interface=74,76,77,81, rmrpwlemqinsnqipgliwinkeemifqipwkhaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamnSlpdieevkdqsrnkgssavrvyrm > 1if1_B interface=33,73,75,76,79,80, mrpwlemqinsnqipgliwinkeemifqipwkHaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamNSlpdieevkdqsrnkgssavrvyrm
interface signature	NRCS/HNRCNS

Estimated binding specificities ?

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# IC=12.276 IC/col=0.722 n_of_columns=17

specificity:

A |   3  24  24   5   0  24  96  24  24   0  92  14   3   0  87   0  85
C |  87  24  24   3   0  24   0  24  24   4   0  67  14   0   3  96   3
G |   3  24  24   3  96  24   0  24  24   0   4  10  12   0   3   0   5
T |   3  24  24  85   0  24   0  24  24  92   0   5  67  96   3   0   3

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updated Fri Dec 13 09:22:35 2024