1if1_AB : 3D-footprint complex

structure name	INTERFERON REGULATORY FACTOR 1 (IRF-1) COMPLEX WITH DNA
reference	Escalante et al.
source	Mus musculus
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1if1_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1if1_A interface=74,76,77,81, rmrpwlemqinsnqipgliwinkeemifqipwkhaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamnSlpdieevkdqsrnkgssavrvyrm > 1if1_B interface=33,73,75,76,79,80, mrpwlemqinsnqipgliwinkeemifqipwkHaakhgwdinkdaclfrswaihtgrykagekepdpktwkaNfRCamNSlpdieevkdqsrnkgssavrvyrm
interface signature	NRCS/HNRCNS

Estimated binding specificities ?

readout + contact

# IC=12.678 IC/col=0.746 n_of_columns=17

specificity:

A |   1   0  13  96  65  11   0  94  24  24   0   6   0  94  24  24   6
C |   1   0   5   0   9  21   2   0  24  24   0  38  96   1  24  24   1
G |   0  96  13   0   9  46   0   1  24  24   0   1   0   0  24  24  88
T |  94   0  65   0  13  18  94   1  24  24  96  51   0   1  24  24   1

scan!

home
updated Sun Jan 4 21:27:32 2026