3D-footprint cannot reliably estimate the specificity of proteins that bind to single-stranded DNA molecules, as these often accumulate many base contacts which distort the calculations.


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updated Thu Sep 12 14:45:07 2024
structure nameCPV (STRAIN D) MUTANT A300D, COMPLEX (VIRAL COAT/DNA), VP2, PH=7.5, T=4 DEGREES C
(PROTEIN PARVOVIRUS COAT PROTEIN)
referenceAgbandje-McKenna et al.
sourceCANINE PARVOVIRUS
experimentX-ray (resolution=3.25, R-factor=?)
structural superfamilyssDNA viruses;
sequence familyParvovirus coat protein VP2;
redundant complexes1p5w
reference complex4dpv_Z
links to other resourcesNAKB PDBSum PDIdb DNAproDB