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interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of proteins that bind to single-stranded DNA molecules, as these often accumulate many base contacts which distort the calculations.

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updated Fri Sep 13 18:07:47 2024

structure name	PARVOVIRUS/DNA COMPLEX (PROTEIN PARVOVIRUS COAT PROTEIN)
reference	Rossmann et al.
source	CANINE PARVOVIRUS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	ssDNA viruses;
sequence family	Parvovirus coat protein VP2;
redundant complexes	1ijs_P 1p5w_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4dpv_Z interface=120,121,122,152,154,219,238,241,242,467,468,470, gsgngsgggggggsggvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavngnmalddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsFEQeifnvvlktvsepptkvynndltaslmvaLdSnntmpftpaamrsetlgfypwkptiptpwryyfqwdrtlipshtgtsgtptniyhgtdpddvqfYtiensvpvhllrtgdefaTgtFFfdckpcrlthtwqtnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaevgysapyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetperftyiahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygpltalnnvppvypngqiwdkefdtdlkprlhvnapfvcqNNcPgqlfvkvapnltneydpdasanmsrivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeksqlaprkly