1imh_CD : 3D-footprint complex

structure name	TONEBP/DNA COMPLEX
reference	Lopez-Rodriguez et al. Nat.Struct.Biol. 9 90 2002
source	Homo sapiens
experiment	X-ray (resolution=2.86, R-factor=?)
structural superfamily	E set domains;p53-like transcription factors;
reference complex	1imh_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1imh_C interface=30,33,35,36,39,177, kkspmlcgqypvksegkelkivvqpetqhRarYlTEgsRgsvkdrtqqgfptvkleghnepvvlqvfvgndsgrvkphgfyqacrvtgrnttpckevdiegttvievgldpsnnmtlavdcvgilklrnadvearigiagskkkstrarlvfrvnimrkdgstltlqtpsspilctQpagvpeilkkslhscsvkgeeevfligknflkgtkvifqenvsdenswkseaeidmelfhqnhlivkvppyhdqhitlpvsvgiyvvtnagrshdvqpftytpd > 1imh_D interface=33,35,36, kkspmlcgqypvksegkelkivvqpetqhrarYlTEgsrgsvkdrtqqgfptvkleghnepvvlqvfvgndsgrvkphgfyqacrvtgrnttpckevdiegttvievgldpsnnmtlavdcvgilklrnadvearigiagskkkstrarlvfrvnimrkdgstltlqtpsspilctqpagvpeilkkslhscsvkgeeevfligknflkgtkvifqenvsdenswkseaeidmelfhqnhlivkvppyhdqhitlpvsvgiyvvtnagrshdvqpftytpd
interface signature	RYTERQ/YTE

Estimated binding specificities ?

readout + contact

# IC=5.408 IC/col=0.492 n_of_columns=11

specificity:

A |  10   0   0  74  66  24  24  24  24  24   0
C |  10   0   0   2  10  24  24  24  24  24   0
G |  12  96  96  10  10  24  24  24  24  24  96
T |  64   0   0  10  10  24  24  24  24  24   0

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updated Tue Jul 29 14:58:13 2025