1jfi_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE NC2-TBP-DNA TERNARY COMPLEX
reference	New York SGX Research Center for Structural Genomics (NYSGXRC)
source	HOMO SAPIENS
experiment	X-ray (resolution=2.62, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1jfi_A interface=20, arfpparikkimqtdeeigKvaaavpviisralelflesllkkacqvtqsrtmttshlkqcie > 1jfi_B interface=94, ddltipraainkmiketlpnvrvandarelvvncctefihlisseaneicnksekktispehviqaleslgfgsyisevkevlqecktvalkrRkassrlenlgipeeellrqqqelfakarqqqaelaqqewlq > 1jfi_C interface=12,14,42,57,59,65,67,102,104,133,134,148,150,156,158, shmsgivpqlqNiVstvnlgckldlktialrarnaeynpkrFaavimrireprttaLiFssgkmVcTgakseeqsrlaarkyarvvqklgfpakfldfkiqNmVgscdvkfpirleglvlthqqfssyepelFPgliyrmikprivlLiFvsgkvVlTgakvraeiyeafeniypilkgfrkt
interface signature	K/R/NVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=9.921 IC/col=0.827 n_of_columns=12

specificity:

A |   0  96   0  96  96  96  96  16  13  24  24  16
C |   0   0   0   0   0   0   0  13  13  24  24  13
G |   0   0   0   0   0   0   0  54  48  24  24  13
T |  96   0  96   0   0   0   0  13  22  24  24  54

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updated Fri Dec 13 09:25:18 2024