interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF THE NC2-TBP-DNA TERNARY COMPLEX
(TRANSCRIPTION REGULATOR NC2 BETA CHAIN)
referenceNew York SGX Research Center for Structural Genomics (NYSGXRC)
sourceHOMO SAPIENS
experimentX-ray (resolution=2.62, R-factor=0.236)
structural superfamilyHistone-fold;
sequence familyHistonelike transcription factor CBF/;
multimeric complexes1jfi_ABC
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  RAAANA------RT                      +-------1jfi_B    
                       +--------------6 
  --------RA----       !              +-------6g0l_D    
                       !  
  ------RA------       !                      +7xsx_a    
                       !      +---------------5 
  --LC--RT------       !      !               +8hr1_E    
                     -11      ! 
  ------RT------       !    +-9                  +8u14_G    
                       !    ! !                +-3 
  ------RA------       !    ! !     +----------4 +1zla_C    
                       !    ! !     !          ! 
  ------RG------       !    ! +-----8          +8ox0_C    
                       !    !       ! 
  ------RG------       +---10       +----------8jla_C    
                            !  
  ------RG------            !                   +7e9c_G    
                            !                 +-1 
  ------RG------            !       +---------2 +8txv_G    
                            !       !         ! 
  ------RG------            +-------7         +5x0y_G    
                                    ! 
  ------RA--RA--                    +---------6a5l_g    
                     

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updated Sun Aug 3 05:39:04 2025