1jgg_AB : 3D-footprint complex

structure name	EVEN-SKIPPED HOMEODOMAIN COMPLEXED TO AT-RICH DNA
reference	Aggarwal et al. 'EMBO 14 6280 1995
source	Drosophila melanogaster
experiment	X-ray (resolution=2.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1jgg_A interface=1,2,3,45,48,49,52,56, RYRtaftrdqlgrlekefykenyvsrprrcelaaqlnlpestikVwfQNrrMkdkRq > 1jgg_B interface=1,2,3,45,48,49,52,53,56, RYRtaftrdqlgrlekefykenyvsrprrcelaaqlnlpestikVwfQNrrMKdkRq
interface signature	RYRVQNMR/RYRVQNMKR

Estimated binding specificities ?

readout + contact

# IC=10.381 IC/col=1.038 n_of_columns=10

specificity:

A |  75  96   0   0   7  75  96   0   0  73
C |   7   0   0   0  75   7   0   0   0   7
G |   7   0   0   0   7   7   0   0   0   9
T |   7   0  96  96   7   7   0  96  96   7

scan!

home
updated Fri Dec 13 09:25:35 2024