| structure name | CRYSTAL STRUCTURE OF A Y-FAMILY DNA POLYMERASE IN A TERNARY COMPLEX WITH DNA SUBSTRATES AND AN INCOMING NUCLEOTIDE (DNA polymerase IV family Y) |
| reference | Boudsocq et al. 'Cell(Cambridge,Mass.)' 107 91 2001 |
| source | Sulfolobus solfataricus |
| experiment | X-ray (resolution=1.70, R-factor=0.213) |
| structural superfamily | DNA/RNA polymerases;Lesion bypass DNA polymerase Y-family, little finger domain; |
| sequence family | impB/mucB/samB family; |
| redundant complexes | 1jxl_A 1n48_A 1n56_B 1ryr_A 1rys_B 1s0m_B 1s0n_A 1s0o_B 1s10_A 1s97_C 1s9f_A 2ia6_B 2ibk_A 2r8g_A 2r8h_A 2r8i_A 2rdj_B 3m9m_B 3m9n_B 3m9o_B 4rzr_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix formatVG----AGAG----PC------MG------IC------HALCST----RGRG +4f4w_A +-1 VTFT--AT------PC----------ST------------LA----RARTRG +-2 +1jx4_A ! ! VG----AG------PCIAKAQA--KC----YC--------LCST----RC-- +---------------3 +4f4y_B ! ! ------AC--AG--------------ST--YG----RG--LC------RCKT +----5 +4f4z_A ! ! QT--WA--ITRTST--------------ST--PATA--------RG------ --6 +---------------4ecq_A ! ------VASA--AAPT--MT----------EG----RT--FT----RT---- ! +4irk_B +-------------------4 ------MASA--AAPC--IC----------EG----------TG------RG +2oh2_B |
home
updated Fri Sep 13 15:43:37 2024