interface graph thumbnail
legend  pdf

structure namePAX5(1-149)+ETS-1(331-440)+DNA
referenceWolberger et al. Mol.Cell 8 1267 2001
sourceMUS MUSCULUS / HOMO SAPIENS
experimentX-ray (resolution=2.25, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex1k78_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKRRY/SSSRR

Estimated binding specificities ?

readout + contactlogo
# IC=7.770 IC/col=0.457 n_of_columns=17 specificity:   
A |   0   0   0  69  24  24  24  24  24  24  24  24   0   0  69  24  11
C |  96   0   0  11  24  24  24  24  24  24  24  24  87  96   8  24   8
G |   0  96  96   8  24  24  24  24  24  24  24  24   1   0  11  24   8
T |   0   0   0   8  24  24  24  24  24  24  24  24   8   0   8  24  69
scan!

home
updated Fri Dec 13 09:27:23 2024