1llm_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA
reference	Wolfe et al.
source	MUS MUSCULUS, SACCHAROMYCES CEREVISIAE
experiment	X-ray (resolution=1.50, R-factor=?)
structural superfamily	beta-beta-alpha zinc fingers;
reference complex	1llm_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1llm_C interface=15,17,18,21,43,45,46,49, mkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhrdiqhilpiledkveellsknyhlenevarlkklvge > 1llm_D interface=15,17,18,21,43,45,46,49, mkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhrdiqhilpiledkveellsknyhlenevarlkklv
interface signature	RDHTRDER/RDHTRDER

Estimated binding specificities ?

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# IC=13.761 IC/col=1.147 n_of_columns=12

specificity:

A |  13   0   0  96   0   0   0   0  13   0   0   0
C |  54  96  96   0  96   0  96   0  13   0   0   0
G |  13   0   0   0   0  96   0  96  16  96  96  96
T |  16   0   0   0   0   0   0   0  54   0   0   0

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updated Mon Sep 9 12:48:55 2024