1mjq_GHIJ : 3D-footprint complex

structure name	METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE
reference	Phillips et al. 'Structure 8 905 2000
source	Escherichia coli
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	Ribbon-helix-helix;
reference complex	1mjo_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1mjq_G interface=23,25,27, aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey > 1mjq_H interface=23,25,27, aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey > 1mjq_I interface=23,25,27, aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey > 1mjq_J interface=23,25,27, aewsgeyispyaehgkkseqvkKiTvSiplkvlkiltdertrrkvnnlrhatnsellceaflhaftgqplpddadlrkersdeipeaakeimremginpetwey
interface signature	KTS/KTS/KTS/KTS

Estimated binding specificities ?

readout + contact

# IC=16.790 IC/col=1.049 n_of_columns=16

specificity:

A |  96   0  32   0  71   0   0   0  28   0  96   5  94  74   0   1
C |   0   0   3   0   5   0  96  36   0   0   0   8   0   0  96   1
G |   0  96  21   0   5   0   0   0   0  96   0   5   1   1   0   0
T |   0   0  40  96  15  96   0  60  68   0   0  78   1  21   0  94

scan!

home
updated Mon Sep 9 13:03:27 2024