1n6j_AB : 3D-footprint complex

structure name	STRUCTURAL BASIS OF SEQUENCE-SPECIFIC RECRUITMENT OF HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2
reference	Stroud et al. Nature 422 730 2003
source	HOMO SAPIENS
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	SRF-like;
reference complex	1n6j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1n6j_A interface=2,22, gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrrgig > 1n6j_B interface=2,22, gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr
interface signature	RK/RK

Estimated binding specificities ?

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# IC=7.163 IC/col=0.716 n_of_columns=10

specificity:

A |  48   0  96  24  24  24  48   0  96   0
C |  24   0   0  24  24  24  24   0   0   0
G |  12   0   0  24  24  24   0   0   0  96
T |  12  96   0  24  24  24  24  96   0   0

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updated Sun Jan 4 22:10:43 2026