interface graph thumbnail
legend  pdf

structure nameSTRUCTURAL BASIS OF SEQUENCE-SPECIFIC RECRUITMENT OF HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2
(MYOCYTE-SPECIFIC ENHANCER FACTOR 2B)
referenceStroud et al. Nature 422 730 2003
sourceHOMO SAPIENS
experimentX-ray (resolution=2.20, R-factor=0.243)
structural superfamilySRF-like;
sequence familySRFtype transcription factor DNAbinding a;
multimeric complexes1n6j_AB 1tqe_PQ 1tqe_RS 6wc5_ABI 6wc5_CDN
redundant complexes1tqe_S 6wc5
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  RT------KA                          +1n6j_A    
                         +------------2 
  RG------KA             !            ! +7x1n_C    
                   +-----4            +-1 
  RTRC--VCKG   L   !     !              +6wc2_D    
                   !     ! 
  RT------KA     --5     +-------------1egw_B    
                   ! 
  RT------KA       !       +-----------3p57_C    
                   +-------3 
  RA--YA--KG   L           +-----------1hbx_A    
                 

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updated Fri Sep 13 15:53:07 2024