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structure nameTERNARY COMPLEX OF THE DNA BINDING DOMAINS OF THE OCT1 AND SOX2 TRANSCRIPTION FACTORS WITH A 19MER OLIGONUCLEOTIDE FROM THE HOXB1 REGULATORY ELEMENT
sourceHOMO SAPIENS
experimentNMR
structural superfamilylambda repressor-like DNA-binding domains;Homeodomain-like;HMG-box;
reference complex1o4x_A 1o4x_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQTRVNQR/RNFMRNSSY

Estimated binding specificities ?

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# IC=16.834 IC/col=1.052 n_of_columns=16 specificity:   
A |   0  89   0   6  24   6   0  96   6   6  96   0  96  96  96   0
C |  96   1   0   6  24   9  96   0   6   6   0  96   0   0   0   0
G |   0   6   0   9  24  75   0   0   9  75   0   0   0   0   0  96
T |   0   0  96  75  24   6   0   0  75   9   0   0   0   0   0   0
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updated Mon Sep 9 13:09:35 2024