1p47_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TANDEM ZIF268 MOLECULES COMPLEXED TO DNA
reference	Peisach et al.
source	Mus musculus
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	beta-beta-alpha zinc fingers;
reference complex	4x9j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1p47_A interface=17,19,20,23,45,47,48,51,73,75,76,79, erpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRsDHltThirthtgekpfacdicgrkfaRsDErkRhtkihlrq > 1p47_B interface=16,18,19,22,44,45,46,47,50,72,74,75,78, rpyacpvescdrrfsRsDEltRhirihtgqkpfqcricmrnfsRSDHltThirthtgekpfacdicgrkfaRsDErkRhtkihl
interface signature	RDERRDHTRDER/RDERRSDHTRDER

Estimated binding specificities ?

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# IC=22.969 IC/col=1.148 n_of_columns=20

specificity:

A |  80   0   5   0   0   0  90   0   5   0   0   5   0   0   0  85   0   5   0   6
C |   5  96   5  96  96  96   6  96   5  96  96   5  96  96  96   5  96   1  96  80
G |   6   0  85   0   0   0   0   0  80   0   0  81   0   0   0   5   0  90   0   5
T |   5   0   1   0   0   0   0   0   6   0   0   5   0   0   0   1   0   0   0   5

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updated Mon Sep 9 13:54:32 2024