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structure nameCRYSTAL STRUCTURE OF THE A(-31) ADENOVIRUS MAJOR LATE PROMOTER TATA BOX VARIANT BOUND TO WILD-TYPE TBP (ARABIDOPSIS THALIANA TBP ISOFORM 2). TATA ELEMENT RECOGNITION BY THE TATA BOX-BINDING PROTEIN HAS BEEN CONSERVED THROUGHOUT EVOLUTION.
(TRANSCRIPTION INITIATION FACTOR TFIID-1)
referencePatikoglou et al. 'Genes 13 3217 1999
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=2.30, R-factor=0.182)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1vol_AB
reference complex1qna_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=8.431 IC/col=1.054 n_of_columns=8 specificity:   
A |  13   0  13   0   0  96   0   0
C |  54   0  13   0   0   0   0   0
G |  13   0  16   0   0   0   0   0
T |  16  96  54  96  96   0  96  96
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updated Thu Sep 12 15:22:26 2024