1r4i_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF ANDROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO A DIRECT REPEAT RESPONSE ELEMENT
reference	Shaffer et al. Proc.Natl.Acad.Sci.USA 101 4758 2004
source	Rattus norvegicus
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	8rm6_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1r4i_A interface=26,27,31, pqktclicgdeasgahygaltcgscKVffkRaaegkqkylcasrndctidkfrrkncpscrlrkcyeagmtlga > 1r4i_B interface=14,24,25,28,29, ktclicgdeasgaHygaltcgscKVffKRaaegkqkylcasrndctidkfrrkncpscrlrkcyeagmtlg
interface signature	KVR/HKVKR

Estimated binding specificities ?

readout + contact

# IC=7.031 IC/col=0.639 n_of_columns=11

specificity:

A |  96   0  96  24  24  24  57   0  14  24  13
C |   0  96   0  24  24  24  13   0   0  24  68
G |   0   0   0  24  24  24  13  96   0  24   2
T |   0   0   0  24  24  24  13   0  82  24  13

scan!

home
updated Wed Jun 24 11:23:58 2026