1ram_AB : 3D-footprint complex

structure name	A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER
reference	Chen et al. Nat.Struct.Biol. 5 67 1998
source	Mus musculus
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	p53-like transcription factors;E set domains;
reference complex	9bdw_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ram_A interface=15,17,18,20,21,169,200, pyveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdKvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd > 1ram_B interface=18,20,21,169, pyveiieqpkqrgmrfrYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd
interface signature	RRYCERK/YCER

readout + contact

# IC=6.253 IC/col=0.782 n_of_columns=8

A |  43  61  24   0   0   0   0  69
C |  17  19  24   0   0  96  96  11
G |  17   8  24   0   0   0   0   8
T |  19   8  24  96  96   0   0   8

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updated Mon Sep 9 14:04:08 2024