1ram_AB : 3D-footprint complex

structure name	A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER
reference	Chen et al. Nat.Struct.Biol. 5 67 1998
source	Mus musculus
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	p53-like transcription factors;E set domains;
reference complex	9bdw_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ram_A interface=15,17,18,20,21,169,200, pyveiieqpkqrgmRfRYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdKvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd > 1ram_B interface=18,20,21,169, pyveiieqpkqrgmrfrYkCEgrsagsipgerstdttkthptikingytgpgtvrislvtkdpphrphphelvgkdcrdgyyeadlcpdrsihsfqnlgiqcvkkrdleqaisqriqtnnnpfhvpieeqrgdydlnavrlcfqvtvrdpagrpllltpvlshpifdnRapntaelkicrvnrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyadpslqapvrvsmqlrrpsdrelsepmefqylpd
interface signature	RRYCERK/YCER

readout + contact

# IC=6.271 IC/col=0.784 n_of_columns=8

A |  48  56  24   0   0   0   0  72
C |  16  16  24   0   0  96  96   8
G |  16  16  24   0   0   0   0   8
T |  16   8  24  96  96   0   0   8

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updated Fri Dec 13 11:03:40 2024