1sax_AB : 3D-footprint complex

structure name	THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI IN COMPLEX WITH 25-BP DS- DNA
reference	Mallorqui-Fernandez et al.
source	Staphylococcus aureus subsp. aureus
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1sax_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1sax_A interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk > 1sax_B interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk
interface signature	KTRTLR/KTRTLR

Estimated binding specificities ?

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# IC=11.659 IC/col=0.777 n_of_columns=15

specificity:

A |   7  96  24   0  96   0  80  24  24   9   0   0  65  71   0
C |   9   0  24  30   0  96   6  24  24  11   0   0   0  11   0
G |  11   0  24   0   0   0   3  24  24   7  96   0  30  11   0
T |  69   0  24  66   0   0   7  24  24  69   0  96   1   3  96

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updated Mon Sep 9 14:12:59 2024