1sax_AB : 3D-footprint complex

structure name	THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI IN COMPLEX WITH 25-BP DS- DNA
reference	Mallorqui-Fernandez et al.
source	Staphylococcus aureus subsp. aureus
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1sax_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1sax_A interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk > 1sax_B interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk
interface signature	KTRTLR/KTRTLR

Estimated binding specificities ?

readout + contact

# IC=11.546 IC/col=0.770 n_of_columns=15

specificity:

A |  96   3   0  96   0  80  24  24  11   0   0  61  24   0  69
C |   0   3  30   0  96   3  24  24   9   0   0   5  24   0  11
G |   0  14   1   0   0   7  24  24  11  96   0  30  24   0   9
T |   0  76  65   0   0   6  24  24  65   0  96   0  24  96   7

scan!

home
updated Tue Jul 29 16:47:31 2025