1sax_AB : 3D-footprint complex

structure name	THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI IN COMPLEX WITH 25-BP DS- DNA
reference	Mallorqui-Fernandez et al.
source	Staphylococcus aureus subsp. aureus
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1sax_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1sax_A interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk > 1sax_B interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk
interface signature	KTRTLR/KTRTLR

Estimated binding specificities ?

readout + contact

# IC=11.726 IC/col=0.782 n_of_columns=15

specificity:

A |   9  96  24   0  96   0  72  24  24   7   0   0  61  69   0
C |   7   0  24  26   0  96  14  24  24   7   0   0   0   3   0
G |  11   0  24   0   0   0   3  24  24   3  96   0  34  17   0
T |  69   0  24  70   0   0   7  24  24  79   0  96   1   7  96

scan!

home
updated Fri Dec 13 11:12:48 2024