1t9i_AB : 3D-footprint complex

structure name	I-CREI(D20N)/DNA COMPLEX
reference	Monnat Jr. et al. Biochemistry 43 14015 2004
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=1.60, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1t9i_A interface=21,23,25,27,29,31,32,37,39,43,45,65,67,69,71,72,138,139, ntkynkefllylagfvdgngSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds > 1t9i_B interface=21,23,25,27,29,31,32,37,39,43,45,65,67,69,71,72,138,139, ntkynkefllylagfvdgngSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravldsls
interface signature	SIQKNSYQSQTYRRSVKT/SIQKNSYQSQTYRRSVKT

Estimated binding specificities ?

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# IC=23.581 IC/col=1.072 n_of_columns=22

specificity:

A |   3  96  96   9   0   0   0   0   0   6   6  24   3   0  96   0   4   6   6   0   0   0
C |   0   0   0   5  96   3   0   0  96   8  73  24  86   0   0  96   0   1  76   0   0   0
G |  92   0   0  76   0   1  96   0   0   6   6  24   3  96   0   0  89   6   8   0   0  96
T |   1   0   0   6   0  92   0  96   0  76  11  24   4   0   0   0   3  83   6  96  96   0

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updated Fri Dec 13 11:16:34 2024