1t9j_AB : 3D-footprint complex

structure name	I-CREI(Q47E)/DNA COMPLEX
reference	Monnat Jr. et al. Biochemistry 43 14015 2004
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1t9j_A interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1t9j_B interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQSQTYRRVKT/SIQKNSYQSQTYRRVKT

Estimated binding specificities ?

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# IC=22.121 IC/col=1.005 n_of_columns=22

specificity:

A |   0  96  96  28   0   0   0   0   0  12  24  24  11   0  96   0   0  20   6   0   0   0
C |   0   0   0   6  96   9   0   0  96   5  24  24  73   0   0  96   0   0  54   0   0   0
G |  96   0   0  51   0   0  96   0   0  12  24  24   6  96   0   0  96   0   9   0   0  96
T |   0   0   0  11   0  87   0  96   0  67  24  24   6   0   0   0   0  76  27  96  96   0

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updated Mon Sep 9 14:16:41 2024