1t9j_AB : 3D-footprint complex

structure name	I-CREI(Q47E)/DNA COMPLEX
reference	Monnat Jr. et al. Biochemistry 43 14015 2004
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1t9j_A interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1t9j_B interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQSQTYRRVKT/SIQKNSYQSQTYRRVKT

Estimated binding specificities ?

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# IC=22.068 IC/col=1.003 n_of_columns=22

specificity:

A |   0  96  96  22   0   0   0   0   0  19  24  24   5   0  96   0   0  22   5   0   0   0
C |   0   0   0   5  96   8   0   0  96   8  24  24  67   0   0  96   0   0  48   0   0   0
G |  96   0   0  61   0   0  96   0   0   5  24  24  13  96   0   0  96   1   7   0   0  96
T |   0   0   0   8   0  88   0  96   0  64  24  24  11   0   0   0   0  73  36  96  96   0

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updated Tue Jul 29 16:51:33 2025