1t9j_AB : 3D-footprint complex

structure name	I-CREI(Q47E)/DNA COMPLEX
reference	Monnat Jr. et al. Biochemistry 43 14015 2004
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1t9j_A interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1t9j_B interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQSQTYRRVKT/SIQKNSYQSQTYRRVKT

Estimated binding specificities ?

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# IC=23.344 IC/col=1.061 n_of_columns=22

specificity:

A |   0  96  96  21  85   0   0   0   0   5  24  14  50   0  96   0  92   0   1   0   0   0
C |  96   0   0   1   0  96   0   0  96   5  24   9  21   0   0  96   0   0  50   0   0  96
G |   0   0   0  73   0   0  96   0   0  79  24   9  18  96   0   0   3  96   3   0   0   0
T |   0   0   0   1  11   0   0  96   0   7  24  64   7   0   0   0   1   0  42  96  96   0

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updated Fri Dec 13 11:16:50 2024