1tqe_RS : 3D-footprint complex

structure name	MECHANISM OF RECRUITMENT OF CLASS II HISTONE DEACETYLASES BY MYOCYTE ENHANCER FACTOR-2
reference	Liu et al. J.Mol.Biol. 345 91 2005
source	HOMO SAPIENS
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	SRF-like;
reference complex	1n6j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1tqe_R interface=2,22, gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr > 1tqe_S interface=2,22, gRkkiqisrildqrnrqvtftKrkfglmkkayelsvlcdceialiifnsanrlfqyastdmdrvllkyteysephesrtntdiletlkrr
interface signature	RK/RK

Estimated binding specificities ?

readout + contact

# IC=5.807 IC/col=0.581 n_of_columns=10

specificity:

A |   0   0  54  24  24  24  24  13  96   0
C |   0   0  13  24  24  24  24  13   0   0
G |   0   0  13  24  24  24  24  13   0  96
T |  96  96  16  24  24  24  24  57   0   0

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updated Mon Sep 9 14:17:06 2024