1u0c_AB : 3D-footprint complex

structure name	Y33C MUTANT OF HOMING ENDONUCLEASE I-CREI
reference	Stoddard et al. J.Mol.Biol. 342 31 2004
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1u0c_A interface=21,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiiaQiKpNqSCkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1u0c_B interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSCkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SQKNSCQQTYRRVKT/SIQKNSCQQTYRRVKT

Estimated binding specificities ?

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# IC=22.581 IC/col=0.982 n_of_columns=23

specificity:

A |   8   0  96  56   8   0   0   0   0   0  24  24   0   0  96   0   0   0  24   0  96   6  11
C |   8   0   0  13  72   0   0   0  96   0  24  24  96   0   0  96   0   0  24   0   0   4  69
G |  72   0   0  14   8   0  96   0   0   0  24  24   0  96   0   0  96   0  24   0   0  82   8
T |   8  96   0  13   8  96   0  96   0  96  24  24   0   0   0   0   0  96  24  96   0   4   8

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updated Sun Jan 4 23:43:34 2026