1u0c_AB : 3D-footprint complex

structure name	Y33C MUTANT OF HOMING ENDONUCLEASE I-CREI
reference	Stoddard et al. J.Mol.Biol. 342 31 2004
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1u0c_A interface=21,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiiaQiKpNqSCkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1u0c_B interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSCkfkhQlsltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SQKNSCQQTYRRVKT/SIQKNSCQQTYRRVKT

Estimated binding specificities ?

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# IC=22.515 IC/col=0.979 n_of_columns=23

specificity:

A |   8   4   0  96  24  96   0   0   0   0   0  24  24  96   0  96   0  96   8  14   0  96   8
C |   8  84   0   0  24   0  96   0   0  96   0  24  24   0   0   0  96   0   8  13   0   0  69
G |  69   4   0   0  24   0   0  96   0   0  96  24  24   0  96   0   0   0  69  13   0   0  11
T |  11   4  96   0  24   0   0   0  96   0   0  24  24   0   0   0   0   0  11  56  96   0   8

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updated Mon Sep 9 14:18:58 2024