1u35_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE CONTAINING THE HISTONE DOMAIN OF MACROH2A
reference	Chakravarthy et al. Mol.Cell.Biol. 25 7616 2005
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1u35_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1u35_G interface=1,29, KtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk

  
  --RG----       +--------------------------8ox0_C    
                 !  
  --RA----       !           +--------------1zla_C    
                 !           !  
  --RT----       !           !                    +8u14_G    
                 !           !     +--------------1 
  --RG----     -15  +-------12     !              +5x0y_G    
                 !  !        !  +-10  
  --RT----       !  !        !  !  !              +8smw_G    
                 !  !        !  !  +--------------4 
  --RA--RA       !  !        +-11                 +6a5l_g    
                 !  !           !  
  --RG----       !  !           !              +8txv_G    
                 +-14           +--------------5 
  --RG----          !                          +8jla_C    
                    !  
  --RG--RG          !      +----------------8kcb_A    
                    !      !  
  --RC----          !      !            +---6qld_f    
                    !      !     +------7 
  ----RA--          +-----13     !      +---6g0l_D    
                           !  +--8 
  LC------                 !  !  !         +8bvw_e    
                           !  !  +---------6 
  LCRT----                 +--9            +8hr1_E    
                              ! 
  --RA----                    !               +7xsx_a    
                              !             +-2 
  LARG----                    +-------------3 +7unc_a    
                                            ! 
  --RT----                                  +8grq_A

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updated Sun Aug 3 05:57:48 2025