1u35_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE CONTAINING THE HISTONE DOMAIN OF MACROH2A
reference	Chakravarthy et al. Mol.Cell.Biol. 25 7616 2005
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1u35_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1u35_G interface=1,29, KtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk

  
  --RG--                            +----------8txv_G    
                          +---------3 
  LARG--               +--4         +----------7unc_a    
                       !  ! 
  --RT--               !  +--------------------8u14_G    
                 +-----5 
  --RC--         !     !                   +---6qld_f    
                 !     +-------------------2 
  --RA--       +-6                         !   +7xsx_a    
               ! !                         +---1 
  LC----       ! !                             +8bvw_e    
             --7 ! 
  --RGRG       ! +-----------------------------8kcb_A    
               ! 
  --RT--       +-----------------------------8smw_G

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updated Fri Sep 13 16:02:36 2024