1u35_ABCDEFGH
citing 3d-footprint
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structure name
CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLE CONTAINING THE HISTONE DOMAIN OF MACROH2A
reference
Chakravarthy et al. Mol.Cell.Biol. 25 7616 2005
source
HOMO SAPIENS / MUS MUSCULUS
experiment
X-ray (resolution=3.00, R-factor=?)
structural superfamily
Histone-fold;lambda repressor-like DNA-binding domains;p53-like transcription factors;Nucleic acid-binding proteins;P-loop containing nucleoside triphosphate hydrolases;
reference complex
1u35_G
5gtc_H
5o9g_E
5o9g_F
5z3u_A
6a5l_d
6buz_H
6c0w_H
6ftx_B
6iro_A
6nqa_A
6pww_K
6r25_E
6r8y_H
6see_H
6t7a_H
6x0n_f
6x59_H
6y5d_H
6yov_C
7at8_D
7d1z_H
7e8d_H
7eg6_A
7egp_S
7k5x_H
7k60_H
7k63_H
7nkx_a
7nkx_f
7otq_E
7pet_H
7scy_H
7u0g_M
7unc_a
7und_e
7vdt_B
7xcr_F
7xzx_N
7xzz_N
7zs9_e
8a3y_a
8aag_A
8atf_Q
8bvw_e
8byq_e
8ceo_r
8cww_A
8g57_E
8h0v_h
8he5_a
8jh2_e
8jhf_A
8siy_G
8xgc_4
links to other resources
NAKB
PDIdb
DNAproDB
protein sequence
> 1u35_A interface=2,3,28,46, pHRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera > 1u35_B interface=22, dniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 1u35_C interface=1,29, KtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk > 1u35_D interface= RkesysiyvykvlkqvhpdtgisskamgImnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytssk > 1u35_E interface=2,3,4,28,46, pHRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera > 1u35_F interface= kVLRdniqgitkpairrlarrggvkriSgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 1u35_G interface=1,29, KtsrsakagvifpvgrmlryikkghpkyRigvgapvymaavleyltaeilelavnaardnkkgrvtprhillavandeelnqllkgvtiasggvlpnihpellakk > 1u35_H interface=4,10, krgRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiaseasrlahynkrstitsrevqtavrlllpgelakhavsegtkavtkytssk
3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.
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updated Mon Sep 9 14:19:34 2024