1vrr_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RESTRICTION ENDONUCLEASE BSTYI COMPLEX WITH DNA
reference	Samuelson et al. Structure 13 791 2005
source	GEOBACILLUS STEAROTHERMOPHILUS
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Restriction endonuclease-like;
reference complex	2p0j_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1vrr_A interface=46,48,77,115,133,134,136,172,174, mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskEkTkqgqilyspvalneafkekleakgwkesRtnyyvtadpkliretlslepeeqkkvieaagkealksYnqtdfvkdrvaievqfgKYsFvaydlfvkhmafyvsdkidvgveilpmkelskemsSgIsyyegelynvirqgrgvpavplvligiap > 1vrr_B interface=46,48,115,133,134,136,172,174, mrivevyshlngleyiqvhlphiweeiqeiivsidaeacrtkeskEkTkqgqilyspvalneafkekleakgwkesrtnyyvtadpkliretlslepeeqkkvieaagkealksYnqtdfvkdrvaievqfgKYsFvaydlfvkhmafyvsdkidvgveilpmkelskemsSgIsyyegelynvirqgrgvpavplvligiap
interface signature	ETRYKYFSI/ETYKYFSI

Estimated binding specificities ?

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# IC=10.290 IC/col=1.029 n_of_columns=10

specificity:

A |  75   9  96   0  96   0   0   0  73   7
C |   7   7   0   0   0   0  96   0   9   7
G |   7   7   0  96   0   0   0   0   7   9
T |   7  73   0   0   0  96   0  96   7  73

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updated Fri Dec 13 11:26:25 2024