| structure name | STRUCTURE OF RESTRICTION ENDONUCLEASE BSTYI BOUND TO NON-COGNATE DNA (BSTYI) |
| reference | Samuelson et al. Structure 15 449 2007 |
| source | GEOBACILLUS STEAROTHERMOPHILUS |
| experiment | X-ray (resolution=2.10, R-factor=?) |
| structural superfamily | Restriction endonuclease-like; |
| sequence family | Restriction endonuclease BglII; |
| multimeric complexes | 1vrr_AB 2p0j_AB |
| redundant complexes |  1vrr_B
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | EKYS |
Estimated binding specificities ?
| contact |  |
A | 16 0 0 54 C | 13 96 96 13 G | 13 0 0 13 T | 54 0 0 16scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: BSTYI | ||
| AGATCT | PubMed | 1vrr_AB(2.56e-08), 1vrr_A(7.01e-03) |
| GGATCT | PubMed | 1vrr_AB(6.82e-05), 1vrr_A(7.01e-03) |
| AGATCC | PubMed | 1vrr_AB(6.82e-05), 1vrr_A(7.01e-03) |
Dendrogram of similar interfaces ?
matrix formatEC--KGYT------------SC---- L +----------2p0j_A --3 QTSANTYAFG--------STNTSAST L ! +--------1dfm_A +-2 ----NG----RGKT--YTTTDCRGVT L ! +----3bam_A +---1 ----NG----RGRTYT--TTDCRG-- L +----3odh_F |
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updated Fri Sep 13 16:34:38 2024