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structure nameCO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT
(TATA BINDING PROTEIN TBP)
referenceNikolov et al. Nature 365 520 1993
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=2.25, R-factor=0.202)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=8.127 IC/col=1.016 n_of_columns=8 specificity:   
A |  12   0  12   0   0  96   0  96
C |  53   0  21  10   0   0   0   0
G |  21   0  10   0   0   0   0   0
T |  10  96  53  86  96   0  96   0
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updated Mon Dec 16 19:00:40 2024