interface graph thumbnail
legend  pdf

structure name1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG
(TATA BINDING PROTEIN)
referenceBurley et al. Nat.Struct.Biol. 1 638 1994
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=1.90, R-factor=0.194)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes1vol_AB
reference complex1qna_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

readout + contactlogo
# IC=8.673 IC/col=1.084 n_of_columns=8 specificity:   
A |   0   0  13   0   0  96   0  96
C |  68   0  29   0   0   0   0   0
G |  15   0  13   0   0   0   0   0
T |  13  96  41  96  96   0  96   0
scan!

home
updated Thu Jan 8 19:22:08 2026