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legend  pdf

structure name1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG
(TATA BINDING PROTEIN)
referenceBurley et al. Nat.Struct.Biol. 1 638 1994
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=1.90, R-factor=0.194)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
redundant complexes1vtl_E
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=8.431 IC/col=1.054 n_of_columns=8 specificity:   
A |   0  96   0  96  96  54  96  16
C |   0   0   0   0   0  13   0  13
G |   0   0   0   0   0  13   0  54
T |  96   0  96   0   0  16   0  13
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updated Thu Dec 22 18:00:23 2022