1w0t_AB : 3D-footprint complex

structure name	HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
reference	Chapman et al. 'Embo 6 39 2005
source	HOMO SAPIENS
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	1w0t_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1w0t_A interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl > 1w0t_B interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl
interface signature	RSVKDR/RSVKDR

Estimated binding specificities ?

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# IC=12.142 IC/col=1.012 n_of_columns=12

specificity:

A |  73   0   0   0  59  15  64   0   0   0   0   0
C |   4   0   0   0  13   4  13   0   0   4   1   0
G |  10  96  96  96  11   4   9  96  96  92   4   0
T |   9   0   0   0  13  73  10   0   0   0  91  96

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updated Wed Jun 24 11:53:38 2026