1w0t_AB : 3D-footprint complex

structure name	HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
reference	Chapman et al. 'Embo 6 39 2005
source	HOMO SAPIENS
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	1w0t_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1w0t_A interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl > 1w0t_B interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl
interface signature	RSVKDR/RSVKDR

Estimated binding specificities ?

readout + contact

# IC=12.103 IC/col=1.009 n_of_columns=12

specificity:

A |  85  74   5   0   0   5  85   3   0   0   0   3
C |   3  16  88  96  96  14   5   3  96  96  96  16
G |   5   3   3   0   0   3   3   5   0   0   0  10
T |   3   3   0   0   0  74   3  85   0   0   0  67

scan!

home
updated Mon Sep 9 14:25:53 2024