1w0t_AB : 3D-footprint complex

structure name	HTRF1 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
reference	Chapman et al. 'Embo 6 39 2005
source	HOMO SAPIENS
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	1w0t_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1w0t_A interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl > 1w0t_B interface=2,39,40,43,44,47, kRqawlweedknlrsgvrkygegnwskillhykfnnrtSVmlKDrwRtmkkl
interface signature	RSVKDR/RSVKDR

Estimated binding specificities ?

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# IC=12.313 IC/col=1.026 n_of_columns=12

specificity:

A |  74   0   0   0  65   9  64   0   0   0   6   0
C |   4   0   0   0   9   0  10   0   0   5   0   0
G |   9  96  96  96   9   5  13  96  96  91   4   0
T |   9   0   0   0  13  82   9   0   0   0  86  96

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updated Sun Jan 4 23:52:16 2026