1z9c_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA
reference	Fuangthong et al. Mol.Cell 20 131 2005
source	Bacillus subtilis
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1z9c_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1z9c_C interface=61,62,64,66,71,88, hmklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh > 1z9c_D interface=60,61,63,65,66,70,87, mklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTPmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh
interface signature	DSTTRR/DSTTPRR

Estimated binding specificities ?

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# IC=9.939 IC/col=0.552 n_of_columns=18

specificity:

A |   0  24  69  94   1   2  24  77  24  11   2  24   0  24   0  24  24  92
C |   3  24   9   1  14  42  24   1  24  17   0  24   2  24   3  24  24   3
G |   3  24  15   1   3   1  24   1  24  13   0  24   0  24   1  24  24   1
T |  90  24   3   0  78  51  24  17  24  55  94  24  94  24  92  24  24   0

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updated Mon Jan 5 00:07:29 2026