1z9c_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA
reference	Fuangthong et al. Mol.Cell 20 131 2005
source	Bacillus subtilis
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1z9c_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1z9c_E interface=60,61,63,65,70,87, mklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh > 1z9c_F interface=61,62,64,66,71,88, hmklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh
interface signature	DSTTRR/DSTTRR

Estimated binding specificities ?

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# IC=11.852 IC/col=0.593 n_of_columns=20

specificity:

A |   4   0  24  24  94  24   1  24  94  75  24   2  24  34  24   0   7  24  96  92
C |   1   0  24  24   2  24  39  24   1   7  24   0  24   5  24   1   3  24   0   3
G |   1   0  24  24   0  24   5  24   0   7  24   0  24  52  24   3  10  24   0   0
T |  90  96  24  24   0  24  51  24   1   7  24  94  24   5  24  92  76  24   0   1

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updated Wed Jun 24 12:09:14 2026