2c6y_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA
reference	Chuang et al. J.Biol.Chem. 281 17400 2006
source	HOMO SAPIENS
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	2c6y_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2c6y_A interface=49,50,52,53,56,57,73,98, dskppysyaqlivqaitmapdkqltlngiythitknypyyrtadkgwqNSiRHnlSLnryfikvprsqeepgKgsfwridpasesklieqafrkrrpR > 2c6y_B interface=45,49,52,53,56, dskppysyaqlivqaitmapdkqltlngiythitknypyyrtadKgwqNsiRHnlSlnryfikvprsqeepgkgsfwridpasesklieqafrkr
interface signature	NSRHSLKR/KNRHS

Estimated binding specificities ?

readout + contact

# IC=11.291 IC/col=1.026 n_of_columns=11

specificity:

A |   0  96  92  76   9  84  84   4  88   0  96
C |   0   0   0   4  76   4   4   4   4  96   0
G |   0   0   4   4   4   4   4   7   0   0   0
T |  96   0   0  12   7   4   4  81   4   0   0

scan!

home
updated Mon Jan 5 00:18:32 2026