2c6y_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF INTERLEUKIN ENHANCER-BINDING FACTOR 1 BOUND TO DNA
reference	Chuang et al. J.Biol.Chem. 281 17400 2006
source	HOMO SAPIENS
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	2c6y_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2c6y_A interface=49,50,52,53,56,57,73,98, dskppysyaqlivqaitmapdkqltlngiythitknypyyrtadkgwqNSiRHnlSLnryfikvprsqeepgKgsfwridpasesklieqafrkrrpR > 2c6y_B interface=45,49,52,53,56, dskppysyaqlivqaitmapdkqltlngiythitknypyyrtadKgwqNsiRHnlSlnryfikvprsqeepgkgsfwridpasesklieqafrkr
interface signature	NSRHSLKR/KNRHS

Estimated binding specificities ?

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# IC=11.497 IC/col=1.045 n_of_columns=11

specificity:

A |   0  96  83  70  12  78  96   0  83   0  96
C |   0   0   0  12  66   6   0   0   6  96   0
G |   0   0  13   0   6   6   0   0   1   0   0
T |  96   0   0  14  12   6   0  96   6   0   0

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updated Fri Dec 15 11:38:44 2023