interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF RB69 GP43 IN COMPLEX WITH DNA CONTAINING THYMINE GLYCOL
(DNA polymerase)
referenceWallace et al. Proc.Natl.Acad.Sci.USA 104 814 2007
sourceEnterobacteria phage RB69
experimentX-ray (resolution=2.65, R-factor=?)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family B, exonuclease do;
reference complex3qex_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKPDTKRK

Estimated binding specificities ?

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# IC=2.917 IC/col=0.583 n_of_columns=5 specificity:   
A |   0  12   0  24  60
C |   0  12  12  24  12
G |  96  60  84  24  12
T |   0  12   0  24  12
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updated Thu Sep 12 16:01:35 2024