2ere_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A LEU3 DNA-BINDING DOMAIN COMPLEXED WITH A 15MER DNA DUPLEX
reference	Fitzgerald et al. Structure 14 725 2006
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	Zn2/Cys6 DNA-binding domain;
reference complex	2er8_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ere_A interface=9,10,36,40, facvecrqQKskcdahpctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl > 2ere_B interface=9,10,36,40, facvecrqQKskcdahpctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl
interface signature	QKRR/QKRR

Estimated binding specificities ?

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# IC=8.514 IC/col=0.851 n_of_columns=10

specificity:

A |   0   0   0  13  24  24  13   0   0   0
C |  96  96   0  13  24  24  57  96   0   0
G |   0   0  96  57  24  24  13   0  96  96
T |   0   0   0  13  24  24  13   0   0   0

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updated Fri Dec 13 11:59:40 2024