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structure nameCRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN COMPLEXED WITH A 12MER DNA DUPLEX
(Regulatory protein LEU3)
referenceFitzgerald et al. Structure 14 725 2006
sourceSaccharomyces cerevisiae
experimentX-ray (resolution=2.85, R-factor=0.237)
structural superfamilyZn2/Cys6 DNA-binding domain;
sequence familyFungal Zn2Cys6 binuclear cluster domain;
multimeric complexes2er8_AB 2er8_CD 2ere_AB 2erg_AB
redundant complexes2ere_B 2erg_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQKR

Estimated binding specificities ?

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# IC=2.603 IC/col=0.651 n_of_columns=4 specificity:   
A |  15  10   3   1
C |  49  63   3   1
G |  17  13  87  92
T |  15  10   3   2
scan!

Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: LEU3
CCGGNNCCGGPubMed2er8_C(4.12e-03), 2er8_AB(1.01e-07), 2er8_CD(2.65e-10), ... (total=7)
GCCGGNNCCGGCPubMed2er8_C(7.23e-03), 2er8_AB(7.39e-07), 2er8_CD(5.64e-09), ... (total=7)

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updated Tue Dec 17 22:41:28 2024