2erg_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN WITH A SINGLE H50C MUTATION COMPLEXED WITH A 15MER DNA DUPLEX
reference	Fitzgerald et al. Structure 14 725 2006
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	Zn2/Cys6 DNA-binding domain;
reference complex	2er8_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2erg_A interface=9,10,41,45, facvecrqQKskcdacerapepctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl > 2erg_B interface=9,10,41,45, facvecrqQKskcdacerapepctkcakknvpcilkrdfrRtykRarneaiekrfkeltrtltnl
interface signature	QKRR/QKRR

Estimated binding specificities ?

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# IC=8.431 IC/col=0.843 n_of_columns=10

specificity:

A |   0   0   0  13  24  24  16   0   0   0
C |  96  96   0  13  24  24  54  96   0   0
G |   0   0  96  54  24  24  13   0  96  96
T |   0   0   0  16  24  24  13   0   0   0

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updated Fri Dec 13 11:59:46 2024