2euw_A : 3D-footprint complex

structure name	STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA4T) (NDT80 protein)
reference	Lamoureux et al. Structure 14 555 2006
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=1.68, R-factor=0.178)
structural superfamily	p53-like transcription factors;
sequence family	NDT80 / PhoG like DNAbinding family;
reference complex	1mnn_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2euw_A interface=25,26,79,139,140,141,281, viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRnyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDKgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq
interface signature	PRRRDKR

Estimated binding specificities ?

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# IC=8.715 IC/col=0.968 n_of_columns=9

specificity:

A |   6  12   0   0  96   0   6   0   6
C |  12   6   0   0   0   0   6  96   6
G |  12   6   0  96   0  96  24   0  78
T |  66  72  96   0   0   0  60   0   6

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updated Thu Jan 8 19:57:55 2026