2evh_A : 3D-footprint complex

structure name	STRUCTURE OF A NDT80-DNA COMPLEX (MSE MUTANT MA7G) (NDT80 protein)
reference	Lamoureux et al. Structure 14 555 2006
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=1.99, R-factor=0.180)
structural superfamily	p53-like transcription factors;
sequence family	NDT80 / PhoG like DNAbinding family;
reference complex	1mnn_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2evh_A interface=25,26,79,80,139,140,281, viltqlnedgttsnyfdkrklkiaPRstlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykRNyftlvstfetancdldtflkssfdllvgrlrvqyfaikikaknddddteinlvqhtakRDkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvilgavvdpdgipydelalkngskgmfvylqemktppliirgRspsnyassq
interface signature	PRRNRDR

Estimated binding specificities ?

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# IC=8.957 IC/col=0.995 n_of_columns=9

specificity:

A |   7   0  73   0  96   0  96   7  73
C |  73   0   7  96   0  96   0   7   9
G |   7  96   7   0   0   0   0  75   7
T |   9   0   9   0   0   0   0   7   7

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updated Thu Sep 12 16:04:02 2024