2ezv_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TETRAMERIC RESTRICTION ENDONUCLEASE SFII BOUND TO COGNATE DNA.
reference	Aggarwal et al.
experiment	X-ray (resolution=2.40, R-factor=?)
reference complex	2ezv_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ezv_A interface=106,109,113,206,208,211,213,216,218,220, mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEknRdtlQrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler > 2ezv_B interface=106,208,210,213,215,218,220,222, mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEknrdtlqrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkdvegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler
interface signature	ERQKSRERRY/EKSRERRY

Estimated binding specificities ?

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# IC=10.630 IC/col=0.818 n_of_columns=13

specificity:

A |   0   0   0   9  24  24  24  11   0   0   0   0  67
C |   0  96  96   9  24  24  24   9   0   0  96  96   9
G |  96   0   0  11  24  24  24   9  96  96   0   0   9
T |   0   0   0  67  24  24  24  67   0   0   0   0  11

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updated Fri Dec 13 12:00:20 2024