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structure namePHAGE PHI29 TRANSCRIPTION REGULATOR P4-DNA COMPLEX
(Late genes activator)
referencePerez-Lago et al. Mol.Cell 22 73 2006
sourceBacillus phage phi29
experimentX-ray (resolution=2.70, R-factor=0.232)
multimeric complexes2fio_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQR

Estimated binding specificities ?

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# IC=4.475 IC/col=0.895 n_of_columns=5 specificity:   
A |   0   0   0  13  13
C |   0   0   0  13  16
G |   0  96   0  13  54
T |  96   0  96  57  13
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Related DNA sequences reported in the literature ?


sitesourcematches (E-value)
term: P4
TGTTCACCPubMed2fio_A(1.79e-03)
CCAACPubMed2fio_A(1.38e-04)

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updated Sun Aug 3 06:12:09 2025