2fio_AB : 3D-footprint complex

structure name	PHAGE PHI29 TRANSCRIPTION REGULATOR P4-DNA COMPLEX
reference	Perez-Lago et al. Mol.Cell 22 73 2006
source	Bacillus phage phi29
experiment	X-ray (resolution=2.70, R-factor=?)
reference complex	2fio_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2fio_A interface=4,5, pktQRgiyhnlkeseyvasntdvtfffsselylnkfldgyqeyrkkfnkkiervavtpwnmdmladitfysevekrgfhawlkgdnatwrevhvyalrimtkpntldwsriqkprlrerrksm > 2fio_B interface=4,5, pktQRgiyhnlkeseyvasntdvtfffsselylnkfldgyqeyrkkfnkkiervavtpwnmdmladitfysevekrgfhawlkgdnatwrevhvyalrimtkpntldwsriqk
interface signature	QR/QR

Estimated binding specificities ?

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# IC=8.636 IC/col=0.279 n_of_columns=31

specificity:

A |  96  96   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  48   0   0   0
C |   0   0  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16   0  16   0
G |   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16  96  16   0
T |   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16   0  64  96

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updated Mon Sep 9 15:00:02 2024