2fld_AB : 3D-footprint complex

structure name	I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY
reference	Havranek et al. Nature 441 656 2006
source	Monomastix sp.
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	2fld_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2fld_A interface=19,21,23,27,29,30,36,44,65,67,70,72,74,76,78, tlqpteaayiagfldgdgSiYaLlipRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki > 2fld_B interface=19,21,23,25,27,29,30,36,44,65,67,70,72,74,76,78, tlqpteaayiagfldgdgSiYaLlIpRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagkies
interface signature	SYLRDYQINRRDIDR/SYLIRDYQINRRDIDR

Estimated binding specificities ?

readout + contact

# IC=20.345 IC/col=0.925 n_of_columns=22

specificity:

A |   0  96   0   6  80   0   0   0   0   6  24  24  85   0  96   0   0   5  24  24  16   5
C |  96   0   0   0   5   0   0   0  96   5  24  24   0   0   0  96  96  12  24  24  80  74
G |   0   0  96   0   6  96  96   0   0  80  24  24   0  96   0   0   0  74  24  24   0  12
T |   0   0   0  90   5   0   0  96   0   5  24  24  11   0   0   0   0   5  24  24   0   5

scan!

home
updated Tue Jul 29 17:41:02 2025