2fld_AB : 3D-footprint complex

structure name	I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY
reference	Havranek et al. Nature 441 656 2006
source	Monomastix sp.
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	2fld_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2fld_A interface=19,21,23,27,29,30,36,44,65,67,70,72,74,76,78, tlqpteaayiagfldgdgSiYaLlipRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagki > 2fld_B interface=19,21,23,25,27,29,30,36,44,65,67,70,72,74,76,78, tlqpteaayiagfldgdgSiYaLlIpRpDYkdikyQvslaisfIqrkdkfpylqdiydqlgkrgNlRkdRgDgIaDyRiigsthlsiilpdlvpylrikkkqanrilhiinlypqaqknpskfldlvkivddvqnlnkradelkstnydrlleeflkagkies
interface signature	SYLRDYQINRRDIDR/SYLIRDYQINRRDIDR

Estimated binding specificities ?

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# IC=20.119 IC/col=0.915 n_of_columns=22

specificity:

A |   6   0  24  24   8   0   0   0   0   4  24  24   4   0  96   0   0   6  87   0   0   0
C |   4   1  24  24  74   0   0   0  96   4  24  24  82   0   0  96  96   4   0  96   0   0
G |  82  74  24  24   6  96  96   0   0  10  24  24   6  96   0   0   0   4   1   0   0  96
T |   4  21  24  24   8   0   0  96   0  78  24  24   4   0   0   0   0  82   8   0  96   0

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updated Mon Sep 9 15:04:11 2024